IL_9GGR_223

3D structure

PDB id

9GGR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the HrpA-bound E. coli disome, Class II

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CUUUGAAGUG*CAUGGAG

Length

17 nucleotides

Bulged bases

9GGR|1|AV|U|2132

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9GGR|1|AV|C|2129
9GGR|1|AV|U|2130
9GGR|1|AV|U|2131
9GGR|1|AV|U|2132
9GGR|1|AV|G|2133
9GGR|1|AV|A|2134
9GGR|1|AV|A|2135
9GGR|1|AV|G|2136
9GGR|1|AV|U|2137
9GGR|1|AV|G|2138
*
9GGR|1|AV|C|2153
9GGR|1|AV|A|2154
9GGR|1|AV|U|2155
9GGR|1|AV|G|2156
9GGR|1|AV|G|2157
9GGR|1|AV|A|2158
9GGR|1|AV|G|2159

Current chains

Chain AV

23S ribosomal RNA

Nearby chains

Chain AK

Large ribosomal subunit protein uL1