IL_9GGR_271
3D structure
- PDB id
- 9GGR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the HrpA-bound E. coli disome, Class II
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UGAAG*UGGAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9GGR_271 not in the Motif Atlas
- Homologous match to IL_9DFE_019
- Geometric discrepancy: 0.2043
- The information below is about IL_9DFE_019
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_15190.1
- Basepair signature
- cWW-tSH-tHS-tHS-cWW
- Number of instances in this motif group
- 22
Unit IDs
9GGR|1|N|U|703
9GGR|1|N|G|704
9GGR|1|N|A|705
9GGR|1|N|A|706
9GGR|1|N|G|707
*
9GGR|1|N|U|724
9GGR|1|N|G|725
9GGR|1|N|G|726
9GGR|1|N|A|727
9GGR|1|N|G|728
Current chains
- Chain N
- 23S ribosomal RNA
Nearby chains
- Chain P
- Large ribosomal subunit protein uL2
Coloring options: