IL_9GGR_337

3D structure

PDB id

9GGR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the HrpA-bound E. coli disome, Class II

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UGAUGUGUAGGAUAG*CCUUUA

Length

21 nucleotides

Bulged bases

9GGR|1|N|U|2111, 9GGR|1|N|U|2118

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9GGR|1|N|U|2106
9GGR|1|N|G|2107
9GGR|1|N|A|2108
9GGR|1|N|U|2109
9GGR|1|N|G|2110
9GGR|1|N|U|2111
9GGR|1|N|G|2112
9GGR|1|N|U|2113
9GGR|1|N|A|2114
9GGR|1|N|G|2115
9GGR|1|N|G|2116
9GGR|1|N|A|2117
9GGR|1|N|U|2118
9GGR|1|N|A|2119
9GGR|1|N|G|2120
*
9GGR|1|N|C|2178
9GGR|1|N|C|2179
9GGR|1|N|U|2180
9GGR|1|N|U|2181
9GGR|1|N|U|2182
9GGR|1|N|A|2183

Current chains

Chain N

23S ribosomal RNA

Nearby chains

Chain C

Large ribosomal subunit protein uL1