IL_9GHB_019

3D structure

PDB id

9GHB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Fusidic acid-locked Escherichia coli 70S ribosome with Staphylococcus aureus EF-G in post-translocational state (POST)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

UGAAGAAGCC*GUUGUAAAG

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9GHB|1|A|U|409
9GHB|1|A|G|410
9GHB|1|A|A|411
9GHB|1|A|A|412
9GHB|1|A|G|413
9GHB|1|A|A|414
9GHB|1|A|A|415
9GHB|1|A|G|416
9GHB|1|A|C|417
9GHB|1|A|C|418
*
9GHB|1|A|G|425
9GHB|1|A|U|426
9GHB|1|A|U|427
9GHB|1|A|G|428
9GHB|1|A|U|429
9GHB|1|A|A|430
9GHB|1|A|A|431
9GHB|1|A|A|432
9GHB|1|A|G|433

Current chains

Chain A

16S rRNA

Nearby chains

Chain D

30S ribosomal protein S4