IL_9GHD_060

3D structure

PDB id

9GHD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli 70S ribosome in complex with Staphylococcus aureus FusB-EF-G (FusB-EF-G-70S*)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.41 Å

Loop

Sequence

(5MC)AC*GAAG

Length

7 nucleotides

Bulged bases

9GHD|1|A|A|1493

QA status

Modified nucleotides: 5MC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9GHD|1|A|5MC|1407
9GHD|1|A|A|1408
9GHD|1|A|C|1409
*
9GHD|1|A|G|1491
9GHD|1|A|A|1492
9GHD|1|A|A|1493
9GHD|1|A|G|1494

Current chains

Chain A

16S rRNA

Nearby chains

Chain 9

mRNA

Chain L

30S ribosomal protein S12

Chain a

Large subunit ribosomal RNA; LSU rRNA