3D structure

PDB id
9GHF (explore in PDB, NAKB, or RNA 3D Hub)
Description
Staphylococcus aureus FusB bound to the large subunit of the Escherichia coli 70S ribosome (FusB-70S:LSU)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.4 Å

Loop

Sequence
(5MC)AC*GAAG
Length
7 nucleotides
Bulged bases
9GHF|1|A|A|1493
QA status
Modified nucleotides: 5MC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9GHF|1|A|5MC|1407
9GHF|1|A|A|1408
9GHF|1|A|C|1409
*
9GHF|1|A|G|1491
9GHF|1|A|A|1492
9GHF|1|A|A|1493
9GHF|1|A|G|1494

Current chains

Chain A
16S rRNA

Nearby chains

Chain 9
mRNA
Chain L
30S ribosomal protein S12
Chain a
Large subunit ribosomal RNA; LSU rRNA

Coloring options:

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