IL_9GHG_131
3D structure
- PDB id
- 9GHG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus FusB bound to the small subunit of the S. aureus 70S ribosome (FusB-Sa70S:SSU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.22 Å
Loop
- Sequence
- UGAUGAAG*CGUAAAA
- Length
- 15 nucleotides
- Bulged bases
- 9GHG|1|a|U|420
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9GHG_131 not in the Motif Atlas
- Homologous match to IL_5J7L_020
- Geometric discrepancy: 0.2789
- The information below is about IL_5J7L_020
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_28026.3
- Basepair signature
- cWW-tSH-tWH-cWH-L-tHW-tSS-tHH-cWW
- Number of instances in this motif group
- 2
Unit IDs
9GHG|1|a|U|417
9GHG|1|a|G|418
9GHG|1|a|A|419
9GHG|1|a|U|420
9GHG|1|a|G|421
9GHG|1|a|A|422
9GHG|1|a|A|423
9GHG|1|a|G|424
*
9GHG|1|a|C|435
9GHG|1|a|G|436
9GHG|1|a|U|437
9GHG|1|a|A|438
9GHG|1|a|A|439
9GHG|1|a|A|440
9GHG|1|a|A|441
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain e
- 30S ribosomal protein S4
Coloring options: