IL_9GHG_145
3D structure
- PDB id
- 9GHG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus FusB bound to the small subunit of the S. aureus 70S ribosome (FusB-Sa70S:SSU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.22 Å
Loop
- Sequence
- GGAAU*GGAAC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9GHG_145 not in the Motif Atlas
- Homologous match to IL_4LFB_065
- Geometric discrepancy: 0.069
- The information below is about IL_4LFB_065
- Detailed Annotation
- Triple non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_71154.1
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 10
Unit IDs
9GHG|1|a|G|681
9GHG|1|a|G|682
9GHG|1|a|A|683
9GHG|1|a|A|684
9GHG|1|a|U|685
*
9GHG|1|a|G|721
9GHG|1|a|G|722
9GHG|1|a|A|723
9GHG|1|a|A|724
9GHG|1|a|C|725
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain G
- 50S ribosomal protein L2
- Chain g
- 30S ribosomal protein S6
- Chain l
- 30S ribosomal protein S11
- Chain s
- 30S ribosomal protein S18
- Chain v
- 30S ribosomal protein S21
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