IL_9GHG_147
3D structure
- PDB id
- 9GHG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus FusB bound to the small subunit of the S. aureus 70S ribosome (FusB-Sa70S:SSU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.22 Å
Loop
- Sequence
- GGGAUC*GUC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9GHG_147 not in the Motif Atlas
- Geometric match to IL_8P9A_423
- Geometric discrepancy: 0.1395
- The information below is about IL_8P9A_423
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_31359.1
- Basepair signature
- cWW-L-cWW-L-cWW-L
- Number of instances in this motif group
- 4
Unit IDs
9GHG|1|a|G|782
9GHG|1|a|G|783
9GHG|1|a|G|784
9GHG|1|a|A|785
9GHG|1|a|U|786
9GHG|1|a|C|787
*
9GHG|1|a|G|811
9GHG|1|a|U|812
9GHG|1|a|C|813
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain G
- 50S ribosomal protein L2
- Chain l
- 30S ribosomal protein S11
- Chain v
- 30S ribosomal protein S21
Coloring options: