IL_9GR1_109
3D structure
- PDB id
- 9GR1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S-TEC complex in delivery state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.17 Å
Loop
- Sequence
- AUAAGUAA*UGAAAUU
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9GR1_109 not in the Motif Atlas
- Homologous match to IL_5J7L_289
- Geometric discrepancy: 0.0386
- The information below is about IL_5J7L_289
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_04346.10
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 15
Unit IDs
9GR1|1|a|A|1264
9GR1|1|a|U|1265
9GR1|1|a|A|1266
9GR1|1|a|A|1267
9GR1|1|a|G|1268
9GR1|1|a|U|1269
9GR1|1|a|A|1270
9GR1|1|a|A|1271
*
9GR1|1|a|U|2015
9GR1|1|a|G|2016
9GR1|1|a|A|2017
9GR1|1|a|A|2018
9GR1|1|a|A|2019
9GR1|1|a|U|2020
9GR1|1|a|U|2021
Current chains
- Chain a
- 23S ribosomal RNA
Nearby chains
- Chain e
- 50S ribosomal protein L4
- Chain r
- 50S ribosomal protein L22
- Chain z
- 50S ribosomal protein L32
Coloring options: