IL_9GR1_114

3D structure

PDB id

9GR1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-TEC complex in delivery state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.17 Å

Loop

Sequence

UG*CAUCAG

Length

8 nucleotides

Bulged bases

9GR1|1|a|U|1586

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9GR1_114 not in the Motif Atlas

Homologous match to IL_5J7L_294

Geometric discrepancy: 0.3919

The information below is about IL_5J7L_294

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_87211.1

Basepair signature

cWW-cSW-L-cWW-L

Number of instances in this motif group

1

Unit IDs

9GR1|1|a|U|1417
9GR1|1|a|G|1418
*
9GR1|1|a|C|1584
9GR1|1|a|A|1585
9GR1|1|a|U|1586
9GR1|1|a|C|1587
9GR1|1|a|A|1588
9GR1|1|a|G|1589

Current chains

Chain a

23S ribosomal RNA

Nearby chains