IL_9GR1_115

3D structure

PDB id

9GR1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-TEC complex in delivery state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.17 Å

Loop

Sequence

CGAAG*CUAAG

Length

10 nucleotides

Bulged bases

9GR1|1|a|A|1422

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9GR1_115 not in the Motif Atlas

Homologous match to IL_5J7L_295

Geometric discrepancy: 0.1135

The information below is about IL_5J7L_295

Detailed Annotation

UAA/GAN

Broad Annotation

No text annotation

Motif group

IL_38507.2

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

16

Unit IDs

9GR1|1|a|C|1419
9GR1|1|a|G|1420
9GR1|1|a|A|1421
9GR1|1|a|A|1422
9GR1|1|a|G|1423
*
9GR1|1|a|C|1579
9GR1|1|a|U|1580
9GR1|1|a|A|1581
9GR1|1|a|A|1582
9GR1|1|a|G|1583

Current chains

Chain a

23S ribosomal RNA

Nearby chains