IL_9GR1_129
3D structure
- PDB id
- 9GR1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S-TEC complex in delivery state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.17 Å
Loop
- Sequence
- CGUAAC*GGAGAAG
- Length
- 13 nucleotides
- Bulged bases
- 9GR1|1|a|G|1701
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9GR1_129 not in the Motif Atlas
- Homologous match to IL_5J7L_308
- Geometric discrepancy: 0.0476
- The information below is about IL_5J7L_308
- Detailed Annotation
- tSH-tSH-tHH-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_47346.2
- Basepair signature
- cWW-tSH-L-R-tHH-tHS-cWW
- Number of instances in this motif group
- 7
Unit IDs
9GR1|1|a|C|1688
9GR1|1|a|G|1689
9GR1|1|a|U|1690
9GR1|1|a|A|1691
9GR1|1|a|A|1692
9GR1|1|a|C|1693
*
9GR1|1|a|G|1698
9GR1|1|a|G|1699
9GR1|1|a|A|1700
9GR1|1|a|G|1701
9GR1|1|a|A|1702
9GR1|1|a|A|1703
9GR1|1|a|G|1704
Current chains
- Chain a
- 23S ribosomal RNA
Nearby chains
- Chain A
- Small subunit ribosomal RNA; SSU rRNA
- Chain c
- 50S ribosomal protein L2
Coloring options: