3D structure

PDB id
9GR1 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-TEC complex in delivery state
Experimental method
ELECTRON MICROSCOPY
Resolution
3.17 Å

Loop

Sequence
AUA*UGUUU
Length
8 nucleotides
Bulged bases
9GR1|1|a|U|2495
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_9GR1_155 not in the Motif Atlas
Homologous match to IL_9DFE_094
Geometric discrepancy: 0.1895
The information below is about IL_9DFE_094
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_36931.1
Basepair signature
cWW-cSH-cWW-cWW
Number of instances in this motif group
23

Unit IDs

9GR1|1|a|A|2463
9GR1|1|a|U|2464
9GR1|1|a|A|2465
*
9GR1|1|a|U|2493
9GR1|1|a|G|2494
9GR1|1|a|U|2495
9GR1|1|a|U|2496
9GR1|1|a|U|2497

Current chains

Chain a
23S ribosomal RNA

Nearby chains

Chain Z
Transfer RNA; tRNA
Chain l
50S ribosomal protein L16

Coloring options:


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