IL_9GUL_054

3D structure

PDB id

9GUL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of FLuc-XBP1u+ stalled human 60S ribosome nascent chain complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

(OMG)A(A2M)AG*CUAGUAGC

Length

13 nucleotides

Bulged bases

9GUL|1|L5|A|1650, 9GUL|1|L5|G|1654

QA status

Modified nucleotides: OMG, A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9GUL|1|L5|OMG|1522
9GUL|1|L5|A|1523
9GUL|1|L5|A2M|1524
9GUL|1|L5|A|1525
9GUL|1|L5|G|1526
*
9GUL|1|L5|C|1648
9GUL|1|L5|U|1649
9GUL|1|L5|A|1650
9GUL|1|L5|G|1651
9GUL|1|L5|U|1652
9GUL|1|L5|A|1653
9GUL|1|L5|G|1654
9GUL|1|L5|C|1655

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LC

Large ribosomal subunit protein uL4

Chain LL

60S ribosomal protein L13

Chain LN

60S ribosomal protein L15

Chain La

60S ribosomal protein L27a

Chain Lj

60S ribosomal protein L37