IL_9GUL_081

3D structure

PDB id

9GUL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of FLuc-XBP1u+ stalled human 60S ribosome nascent chain complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

GGACGGUGGCCAUGGAAGUCGGAAUCCGCUAAGGAG*CACC

Length

40 nucleotides

Bulged bases

9GUL|1|L5|G|1975, 9GUL|1|L5|U|1980, 9GUL|1|L5|G|1981, 9GUL|1|L5|A|1984, 9GUL|1|L5|G|1988, 9GUL|1|L5|G|1989, 9GUL|1|L5|U|1997

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9GUL|1|L5|G|1968
9GUL|1|L5|G|1969
9GUL|1|L5|A|1970
9GUL|1|L5|C|1971
9GUL|1|L5|G|1972
9GUL|1|L5|G|1973
9GUL|1|L5|U|1974
9GUL|1|L5|G|1975
9GUL|1|L5|G|1976
9GUL|1|L5|C|1977
9GUL|1|L5|C|1978
9GUL|1|L5|A|1979
9GUL|1|L5|U|1980
9GUL|1|L5|G|1981
9GUL|1|L5|G|1982
9GUL|1|L5|A|1983
9GUL|1|L5|A|1984
9GUL|1|L5|G|1985
9GUL|1|L5|U|1986
9GUL|1|L5|C|1987
9GUL|1|L5|G|1988
9GUL|1|L5|G|1989
9GUL|1|L5|A|1990
9GUL|1|L5|A|1991
9GUL|1|L5|U|1992
9GUL|1|L5|C|1993
9GUL|1|L5|C|1994
9GUL|1|L5|G|1995
9GUL|1|L5|C|1996
9GUL|1|L5|U|1997
9GUL|1|L5|A|1998
9GUL|1|L5|A|1999
9GUL|1|L5|G|2000
9GUL|1|L5|G|2001
9GUL|1|L5|A|2002
9GUL|1|L5|G|2003
*
9GUL|1|L5|C|2016
9GUL|1|L5|A|2017
9GUL|1|L5|C|2018
9GUL|1|L5|C|2019

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LI

Ribosomal protein uL16-like