IL_9GUQ_034
3D structure
- PDB id
- 9GUQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 30S PIC (Pre-Initiation complex)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- AGAAU*GGAAU
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9GUQ_034 not in the Motif Atlas
- Homologous match to IL_4LFB_065
- Geometric discrepancy: 0.1019
- The information below is about IL_4LFB_065
- Detailed Annotation
- Triple non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_49751.4
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 16
Unit IDs
9GUQ|1|A|A|673
9GUQ|1|A|G|674
9GUQ|1|A|A|675
9GUQ|1|A|A|676
9GUQ|1|A|U|677
*
9GUQ|1|A|G|713
9GUQ|1|A|G|714
9GUQ|1|A|A|715
9GUQ|1|A|A|716
9GUQ|1|A|U|717
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain G
- Small ribosomal subunit protein bS6, non-modified isoform
- Chain L
- 30S ribosomal protein S11
- Chain S
- 30S ribosomal protein S18
- Chain V
- 30S ribosomal protein S21
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