IL_9GUT_026

3D structure

PDB id

9GUT (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S mRNA delivery complex (bS1 resolved)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

CGUAAAG*CG

Length

9 nucleotides

Bulged bases

9GUT|1|A|A|572

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9GUT_026 not in the Motif Atlas

Homologous match to IL_5J7L_026

Geometric discrepancy: 0.0851

The information below is about IL_5J7L_026

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_38186.6

Basepair signature

cWW-L-cWW-L-L-R

Number of instances in this motif group

4

Unit IDs

9GUT|1|A|C|569
9GUT|1|A|G|570
9GUT|1|A|U|571
9GUT|1|A|A|572
9GUT|1|A|A|573
9GUT|1|A|A|574
9GUT|1|A|G|575
*
9GUT|1|A|C|880
9GUT|1|A|G|881

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain M

30S ribosomal protein S12

Chain R

30S ribosomal protein S17