IL_9GUT_058

3D structure

PDB id

9GUT (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S mRNA delivery complex (bS1 resolved)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

G(4OC)CC*G(UR3)AAC

Length

9 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: 4OC, UR3

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9GUT_058 not in the Motif Atlas

Geometric match to IL_8CRE_467

Geometric discrepancy: 0.1706

The information below is about IL_8CRE_467

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_65718.4

Basepair signature

cWW-cSH-cWS-cWW-cWW

Number of instances in this motif group

4

Unit IDs

9GUT|1|A|G|1401
9GUT|1|A|4OC|1402
9GUT|1|A|C|1403
9GUT|1|A|C|1404
*
9GUT|1|A|G|1497
9GUT|1|A|UR3|1498
9GUT|1|A|A|1499
9GUT|1|A|A|1500
9GUT|1|A|C|1501

Current chains

Chain A

16S ribosomal RNA

Nearby chains