IL_9GUU_045

3D structure

PDB id

9GUU (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S mRNA delivery complex (consensus)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

GUG*CC

Length

5 nucleotides

Bulged bases

9GUU|1|A|U|1049

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9GUU_045 not in the Motif Atlas

Homologous match to IL_4LFB_042

Geometric discrepancy: 0.1482

The information below is about IL_4LFB_042

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_97561.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

147

Unit IDs

9GUU|1|A|G|1048
9GUU|1|A|U|1049
9GUU|1|A|G|1050
*
9GUU|1|A|C|1208
9GUU|1|A|C|1209

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain O

30S ribosomal protein S14