IL_9GUU_061

3D structure

PDB id

9GUU (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S mRNA delivery complex (consensus)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

GGAG*UGAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9GUU_061 not in the Motif Atlas

Homologous match to IL_4LFB_060

Geometric discrepancy: 0.1527

The information below is about IL_4LFB_060

Detailed Annotation

Double sheared

Broad Annotation

Double sheared

Motif group

IL_58355.2

Basepair signature

cWW-tSH-tHS-cWW

Number of instances in this motif group

43

Unit IDs

9GUU|1|A|G|1416
9GUU|1|A|G|1417
9GUU|1|A|A|1418
9GUU|1|A|G|1419
*
9GUU|1|A|U|1481
9GUU|1|A|G|1482
9GUU|1|A|A|1483
9GUU|1|A|C|1484

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain M

30S ribosomal protein S12