IL_9GUV_046

3D structure

PDB id

9GUV (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S mRNA delivery complex (closed-head)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UGCAU*AUG

Length

8 nucleotides

Bulged bases

9GUV|1|A|C|1054

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9GUV_046 not in the Motif Atlas

Homologous match to IL_4LFB_044

Geometric discrepancy: 0.1556

The information below is about IL_4LFB_044

Detailed Annotation

Isolated cWS basepair

Broad Annotation

No text annotation

Motif group

IL_82453.1

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

5

Unit IDs

9GUV|1|A|U|1052
9GUV|1|A|G|1053
9GUV|1|A|C|1054
9GUV|1|A|A|1055
9GUV|1|A|U|1056
*
9GUV|1|A|A|1204
9GUV|1|A|U|1205
9GUV|1|A|G|1206

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain D

Small ribosomal subunit protein uS3

Chain K

30S ribosomal protein S10

Chain O

30S ribosomal protein S14