IL_9GUW_025

3D structure

PDB id

9GUW (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S-TEC (TEC in expressome position) Inactive state 2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UGAAGAAG*UGUAAAG

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9GUW_025 not in the Motif Atlas

Homologous match to IL_5J7L_020

Geometric discrepancy: 0.0945

The information below is about IL_5J7L_020

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_28026.3

Basepair signature

cWW-tSH-tWH-cWH-L-tHW-tSS-tHH-cWW

Number of instances in this motif group

2

Unit IDs

9GUW|1|A|U|409
9GUW|1|A|G|410
9GUW|1|A|A|411
9GUW|1|A|A|412
9GUW|1|A|G|413
9GUW|1|A|A|414
9GUW|1|A|A|415
9GUW|1|A|G|416
*
9GUW|1|A|U|427
9GUW|1|A|G|428
9GUW|1|A|U|429
9GUW|1|A|A|430
9GUW|1|A|A|431
9GUW|1|A|A|432
9GUW|1|A|G|433

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain E

Small ribosomal subunit protein uS4