IL_9GUW_042

3D structure

PDB id

9GUW (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S-TEC (TEC in expressome position) Inactive state 2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CAAAC*GGUAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9GUW_042 not in the Motif Atlas

Homologous match to IL_5J7L_037

Geometric discrepancy: 0.1156

The information below is about IL_5J7L_037

Detailed Annotation

tSH-tHW-tHS

Broad Annotation

No text annotation

Motif group

IL_17136.7

Basepair signature

cWW-tSH-tHW-tHS-cWW

Number of instances in this motif group

14

Unit IDs

9GUW|1|A|C|779
9GUW|1|A|A|780
9GUW|1|A|A|781
9GUW|1|A|A|782
9GUW|1|A|C|783
*
9GUW|1|A|G|799
9GUW|1|A|G|800
9GUW|1|A|U|801
9GUW|1|A|A|802
9GUW|1|A|G|803

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain L

30S ribosomal protein S11