IL_9GUW_063

3D structure

PDB id

9GUW (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S-TEC (TEC in expressome position) Inactive state 2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UAG*CG

Length

5 nucleotides

Bulged bases

9GUW|1|A|A|1441

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9GUW_063 not in the Motif Atlas

Geometric match to IL_8VTW_061

Geometric discrepancy: 0.3977

The information below is about IL_8VTW_061

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_31462.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

127

Unit IDs

9GUW|1|A|U|1440
9GUW|1|A|A|1441
9GUW|1|A|G|1442
*
9GUW|1|A|C|1460
9GUW|1|A|G|1461

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain U

30S ribosomal protein S20