IL_9GY4_115
3D structure
- PDB id
- 9GY4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 60S ribosomal subunit in complex with E3-UFM1 ligase and RQC machinery components NEMF and LTN1 (Composite map)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GGUGUAGAAUAAG*UAC
- Length
- 16 nucleotides
- Bulged bases
- 9GY4|1|5|A|3963, 9GY4|1|5|A|3965, 9GY4|1|5|A|3966
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9GY4|1|5|G|3955
9GY4|1|5|G|3956
9GY4|1|5|U|3957
9GY4|1|5|G|3958
9GY4|1|5|U|3959
9GY4|1|5|A|3960
9GY4|1|5|G|3961
9GY4|1|5|A|3962
9GY4|1|5|A|3963
9GY4|1|5|U|3964
9GY4|1|5|A|3965
9GY4|1|5|A|3966
9GY4|1|5|G|3967
*
9GY4|1|5|U|4055
9GY4|1|5|A|4056
9GY4|1|5|C|4057
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain Lz
- 60S ribosomal protein L10a
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