IL_9H3N_029

3D structure

PDB id

9H3N (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S subunit precursor C_(L22)-~H61

Experimental method

ELECTRON MICROSCOPY

Resolution

3.69 Å

Loop

Sequence

UUAAGUGGGAAAC*GGAAGAUGUAACGGGGCUAAA

Length

34 nucleotides

Bulged bases

9H3N|1|A|U|1130, 9H3N|1|A|G|1131, 9H3N|1|A|U|1132, 9H3N|1|A|A|1133

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H3N|1|A|U|1018
9H3N|1|A|U|1019
9H3N|1|A|A|1020
9H3N|1|A|A|1021
9H3N|1|A|G|1022
9H3N|1|A|U|1023
9H3N|1|A|G|1024
9H3N|1|A|G|1025
9H3N|1|A|G|1026
9H3N|1|A|A|1027
9H3N|1|A|A|1028
9H3N|1|A|A|1029
9H3N|1|A|C|1030
*
9H3N|1|A|G|1124
9H3N|1|A|G|1125
9H3N|1|A|A|1126
9H3N|1|A|A|1127
9H3N|1|A|G|1128
9H3N|1|A|A|1129
9H3N|1|A|U|1130
9H3N|1|A|G|1131
9H3N|1|A|U|1132
9H3N|1|A|A|1133
9H3N|1|A|A|1134
9H3N|1|A|C|1135
9H3N|1|A|G|1136
9H3N|1|A|G|1137
9H3N|1|A|G|1138
9H3N|1|A|G|1139
9H3N|1|A|C|1140
9H3N|1|A|U|1141
9H3N|1|A|A|1142
9H3N|1|A|A|1143
9H3N|1|A|A|1144

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain J

Large ribosomal subunit protein uL13