IL_9H3N_053

3D structure

PDB id

9H3N (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S subunit precursor C_(L22)-~H61

Experimental method

ELECTRON MICROSCOPY

Resolution

3.69 Å

Loop

Sequence

CUCAUC*GGUACGCGAG

Length

16 nucleotides

Bulged bases

9H3N|1|A|C|2512, 9H3N|1|A|A|2572, 9H3N|1|A|C|2573, 9H3N|1|A|G|2576, 9H3N|1|A|A|2577

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H3N|1|A|C|2510
9H3N|1|A|U|2511
9H3N|1|A|C|2512
9H3N|1|A|A|2513
9H3N|1|A|U|2514
9H3N|1|A|C|2515
*
9H3N|1|A|G|2569
9H3N|1|A|G|2570
9H3N|1|A|U|2571
9H3N|1|A|A|2572
9H3N|1|A|C|2573
9H3N|1|A|G|2574
9H3N|1|A|C|2575
9H3N|1|A|G|2576
9H3N|1|A|A|2577
9H3N|1|A|G|2578

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain D

50S ribosomal protein L3

Chain J

Large ribosomal subunit protein uL13