IL_9H3R_074

3D structure

PDB id

9H3R (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S subunit precursor C-CP_YjgA_(L22)-

Experimental method

ELECTRON MICROSCOPY

Resolution

4.12 Å

Loop

Sequence

GG*CAC

Length

5 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9H3R_074 not in the Motif Atlas

Homologous match to IL_4WF9_090

Geometric discrepancy: 0.5478

The information below is about IL_4WF9_090

Detailed Annotation

Major groove platform

Broad Annotation

No text annotation

Motif group

IL_48076.7

Basepair signature

cWW-cSH-cWW

Number of instances in this motif group

40

Unit IDs

9H3R|1|A|G|2454
9H3R|1|A|G|2455
*
9H3R|1|A|C|2496
9H3R|1|A|A|2497
9H3R|1|A|C|2498

Current chains

Chain A

23S ribosomal RNA

Nearby chains