IL_9H3R_079

3D structure

PDB id

9H3R (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S subunit precursor C-CP_YjgA_(L22)-

Experimental method

ELECTRON MICROSCOPY

Resolution

4.12 Å

Loop

Sequence

UG*CAAG

Length

6 nucleotides

Bulged bases

9H3R|1|A|A|2542

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9H3R_079 not in the Motif Atlas

Homologous match to IL_9DFE_099

Geometric discrepancy: 0.3008

The information below is about IL_9DFE_099

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_94991.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

15

Unit IDs

9H3R|1|A|U|2522
9H3R|1|A|G|2523
*
9H3R|1|A|C|2540
9H3R|1|A|A|2541
9H3R|1|A|A|2542
9H3R|1|A|G|2543

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 4

Large ribosomal subunit protein bL36A

Chain J

Large ribosomal subunit protein uL13