IL_9H3U_043

3D structure

PDB id

9H3U (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S subunit precursor C_H68

Experimental method

ELECTRON MICROSCOPY

Resolution

3.47 Å

Loop

Sequence

UG*CAUCAG

Length

8 nucleotides

Bulged bases

9H3U|1|A|U|1584

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9H3U_043 not in the Motif Atlas

Homologous match to IL_5J7L_294

Geometric discrepancy: 0.3947

The information below is about IL_5J7L_294

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_87211.1

Basepair signature

cWW-cSW-L-cWW-L

Number of instances in this motif group

1

Unit IDs

9H3U|1|A|U|1415
9H3U|1|A|G|1416
*
9H3U|1|A|C|1582
9H3U|1|A|A|1583
9H3U|1|A|U|1584
9H3U|1|A|C|1585
9H3U|1|A|A|1586
9H3U|1|A|G|1587

Current chains

Chain A

23S ribosomal RNA

Nearby chains