IL_9H3U_074

3D structure

PDB id

9H3U (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S subunit precursor C_H68

Experimental method

ELECTRON MICROSCOPY

Resolution

3.47 Å

Loop

Sequence

GCC*GU

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9H3U_074 not in the Motif Atlas

Geometric match to IL_7MLX_001

Geometric discrepancy: 0.31

The information below is about IL_7MLX_001

Detailed Annotation

Single stack bend

Broad Annotation

No text annotation

Motif group

IL_90729.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

30

Unit IDs

9H3U|1|A|G|2102
9H3U|1|A|C|2103
9H3U|1|A|C|2104
*
9H3U|1|A|G|2186
9H3U|1|A|U|2187

Current chains

Chain A

23S ribosomal RNA

Nearby chains