IL_9H3V_073

3D structure

PDB id

9H3V (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S subunit precursor C-CP_L2-L28

Experimental method

ELECTRON MICROSCOPY

Resolution

3.55 Å

Loop

Sequence

UGAUGUGUAGGAUAGG*CCCUUUA

Length

23 nucleotides

Bulged bases

9H3V|1|A|U|2109, 9H3V|1|A|U|2118

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H3V|1|A|U|2106
9H3V|1|A|G|2107
9H3V|1|A|A|2108
9H3V|1|A|U|2109
9H3V|1|A|G|2110
9H3V|1|A|U|2111
9H3V|1|A|G|2112
9H3V|1|A|U|2113
9H3V|1|A|A|2114
9H3V|1|A|G|2115
9H3V|1|A|G|2116
9H3V|1|A|A|2117
9H3V|1|A|U|2118
9H3V|1|A|A|2119
9H3V|1|A|G|2120
9H3V|1|A|G|2121
*
9H3V|1|A|C|2177
9H3V|1|A|C|2178
9H3V|1|A|C|2179
9H3V|1|A|U|2180
9H3V|1|A|U|2181
9H3V|1|A|U|2182
9H3V|1|A|A|2183

Current chains

Chain A

23S ribosomal RNA

Nearby chains