IL_9H3Y_083

3D structure

PDB id

9H3Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S subunit precursor 50S_(L16)-

Experimental method

ELECTRON MICROSCOPY

Resolution

3.09 Å

Loop

Sequence

CUUGAUGUGUAGGAUAGGUGG*CCACCCUUUAAUG

Length

34 nucleotides

Bulged bases

9H3Y|1|A|G|2112, 9H3Y|1|A|U|2118, 9H3Y|1|A|U|2122

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H3Y|1|A|C|2104
9H3Y|1|A|U|2105
9H3Y|1|A|U|2106
9H3Y|1|A|G|2107
9H3Y|1|A|A|2108
9H3Y|1|A|U|2109
9H3Y|1|A|G|2110
9H3Y|1|A|U|2111
9H3Y|1|A|G|2112
9H3Y|1|A|U|2113
9H3Y|1|A|A|2114
9H3Y|1|A|G|2115
9H3Y|1|A|G|2116
9H3Y|1|A|A|2117
9H3Y|1|A|U|2118
9H3Y|1|A|A|2119
9H3Y|1|A|G|2120
9H3Y|1|A|G|2121
9H3Y|1|A|U|2122
9H3Y|1|A|G|2123
9H3Y|1|A|G|2124
*
9H3Y|1|A|C|2174
9H3Y|1|A|C|2175
9H3Y|1|A|A|2176
9H3Y|1|A|C|2177
9H3Y|1|A|C|2178
9H3Y|1|A|C|2179
9H3Y|1|A|U|2180
9H3Y|1|A|U|2181
9H3Y|1|A|U|2182
9H3Y|1|A|A|2183
9H3Y|1|A|A|2184
9H3Y|1|A|U|2185
9H3Y|1|A|G|2186

Current chains

Chain A

23S ribosomal RNA

Nearby chains