IL_9H4N_031

3D structure

PDB id

9H4N (explore in PDB, NAKB, or RNA 3D Hub)

Description

RPL13 (eL13)-mutant 80S ribosome from mouse

Experimental method

ELECTRON MICROSCOPY

Resolution

2.46 Å

Loop

Sequence

AAG*CGCGCUUUU

Length

12 nucleotides

Bulged bases

9H4N|1|A2|G|830

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H4N|1|A2|A|739
9H4N|1|A2|A|740
9H4N|1|A2|G|741
*
9H4N|1|A2|C|827
9H4N|1|A2|G|828
9H4N|1|A2|C|829
9H4N|1|A2|G|830
9H4N|1|A2|C|831
9H4N|1|A2|U|832
9H4N|1|A2|U|833
9H4N|1|A2|U|834
9H4N|1|A2|U|835

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain F2

Large ribosomal subunit protein uL4

Chain G1

60S ribosomal protein L14

Chain M2

Large ribosomal subunit protein eL20