IL_9H4N_034

3D structure

PDB id

9H4N (explore in PDB, NAKB, or RNA 3D Hub)

Description

RPL13 (eL13)-mutant 80S ribosome from mouse

Experimental method

ELECTRON MICROSCOPY

Resolution

2.46 Å

Loop

Sequence

GAAGGUGG*UGUUACAGC

Length

17 nucleotides

Bulged bases

9H4N|1|A2|G|755, 9H4N|1|A2|C|815

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H4N|1|A2|G|752
9H4N|1|A2|A|753
9H4N|1|A2|A|754
9H4N|1|A2|G|755
9H4N|1|A2|G|756
9H4N|1|A2|U|757
9H4N|1|A2|G|758
9H4N|1|A2|G|759
*
9H4N|1|A2|U|810
9H4N|1|A2|G|811
9H4N|1|A2|U|812
9H4N|1|A2|U|813
9H4N|1|A2|A|814
9H4N|1|A2|C|815
9H4N|1|A2|A|816
9H4N|1|A2|G|817
9H4N|1|A2|C|818

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain G1

60S ribosomal protein L14

Chain M2

Large ribosomal subunit protein eL20