IL_9H4N_098
3D structure
- PDB id
- 9H4N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- RPL13 (eL13)-mutant 80S ribosome from mouse
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.46 Å
Loop
- Sequence
- UGGAAUG*CGAGAGA
- Length
- 14 nucleotides
- Bulged bases
- 9H4N|1|A2|U|2416, 9H4N|1|A2|A|2429
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9H4N|1|A2|U|2411
9H4N|1|A2|G|2412
9H4N|1|A2|G|2413
9H4N|1|A2|A|2414
9H4N|1|A2|A|2415
9H4N|1|A2|U|2416
9H4N|1|A2|G|2417
*
9H4N|1|A2|C|2427
9H4N|1|A2|G|2428
9H4N|1|A2|A|2429
9H4N|1|A2|G|2430
9H4N|1|A2|A|2431
9H4N|1|A2|G|2432
9H4N|1|A2|A|2433
Current chains
- Chain A2
- 28S ribosomal RNA
Nearby chains
- Chain L2
- Large ribosomal subunit protein eL19
- Chain N3
- Small ribosomal subunit protein uS15
- Chain T2
- Large ribosomal subunit protein eL27
- Chain W2
- Large ribosomal subunit protein eL30
- Chain a2
- 60S ribosomal protein L34
- Chain j2
- Large ribosomal subunit protein eL43
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