IL_9H4N_125

3D structure

PDB id

9H4N (explore in PDB, NAKB, or RNA 3D Hub)

Description

RPL13 (eL13)-mutant 80S ribosome from mouse

Experimental method

ELECTRON MICROSCOPY

Resolution

2.46 Å

Loop

Sequence

GAG*CGCCGGUGAAAUAC

Length

17 nucleotides

Bulged bases

9H4N|1|A2|U|3694, 9H4N|1|A2|A|3696

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H4N|1|A2|G|3627
9H4N|1|A2|A|3628
9H4N|1|A2|G|3629
*
9H4N|1|A2|C|3688
9H4N|1|A2|G|3689
9H4N|1|A2|C|3690
9H4N|1|A2|C|3691
9H4N|1|A2|G|3692
9H4N|1|A2|G|3693
9H4N|1|A2|U|3694
9H4N|1|A2|G|3695
9H4N|1|A2|A|3696
9H4N|1|A2|A|3697
9H4N|1|A2|A|3698
9H4N|1|A2|U|3699
9H4N|1|A2|A|3700
9H4N|1|A2|C|3701

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain n2

Transfer RNA; tRNA