IL_9H4N_191

3D structure

PDB id

9H4N (explore in PDB, NAKB, or RNA 3D Hub)

Description

RPL13 (eL13)-mutant 80S ribosome from mouse

Experimental method

ELECTRON MICROSCOPY

Resolution

2.46 Å

Loop

Sequence

CAGAUG*CUAG

Length

10 nucleotides

Bulged bases

9H4N|1|m2|A|228

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H4N|1|m2|C|225
9H4N|1|m2|A|226
9H4N|1|m2|G|227
9H4N|1|m2|A|228
9H4N|1|m2|U|289
9H4N|1|m2|G|290
*
9H4N|1|m2|C|297
9H4N|1|m2|U|298
9H4N|1|m2|A|299
9H4N|1|m2|G|300

Current chains

Chain m2

18S ribosomal RNA

Nearby chains

Chain K3

40S ribosomal protein S6

Chain r2

Small ribosomal subunit protein eS4

Chain w2

Small ribosomal subunit protein uS17