IL_9H55_031
3D structure
- PDB id
- 9H55 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Assembly intermediate of human mitochondrial ribosome small subunit in complex with NOA1 and TFB1M (state N3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- UAUAC*GUG
- Length
- 8 nucleotides
- Bulged bases
- 9H55|1|A|U|1259
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9H55_031 not in the Motif Atlas
- Homologous match to IL_6CZR_154
- Geometric discrepancy: 0.1486
- The information below is about IL_6CZR_154
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_76319.4
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 4
Unit IDs
9H55|1|A|U|1257
9H55|1|A|A|1258
9H55|1|A|U|1259
9H55|1|A|A|1260
9H55|1|A|C|1261
*
9H55|1|A|G|1334
9H55|1|A|U|1335
9H55|1|A|G|1336
Current chains
- Chain A
- 12S mitochondrial rRNA
Nearby chains
- Chain C
- 28S ribosomal protein S24, mitochondrial
- Chain D
- 28S ribosomal protein S5, mitochondrial
- Chain H
- 28S ribosomal protein S10, mitochondrial
- Chain K
- 28S ribosomal protein S14, mitochondrial
- Chain Z
- 28S ribosomal protein S33, mitochondrial
Coloring options: