IL_9H55_036

3D structure

PDB id

9H55 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Assembly intermediate of human mitochondrial ribosome small subunit in complex with NOA1 and TFB1M (state N3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CC*GCUACAAAG

Length

11 nucleotides

Bulged bases

9H55|1|A|C|1293

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H55|1|A|C|1278
9H55|1|A|C|1279
*
9H55|1|A|G|1289
9H55|1|A|C|1290
9H55|1|A|U|1291
9H55|1|A|A|1292
9H55|1|A|C|1293
9H55|1|A|A|1294
9H55|1|A|A|1295
9H55|1|A|A|1296
9H55|1|A|G|1297

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain B

28S ribosomal protein S2, mitochondrial

Chain D

28S ribosomal protein S5, mitochondrial

Chain G

28S ribosomal protein S9, mitochondrial

Chain Q

Small ribosomal subunit protein bS21m

Chain S

28S ribosomal protein S23, mitochondrial