IL_9H9H_065

3D structure

PDB id

9H9H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex 1 30S-IF1-IF2-IF3-GE81112

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

UAAC*GAG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9H9H_065 not in the Motif Atlas

Geometric match to IL_5J7L_065

Geometric discrepancy: 0.259

The information below is about IL_5J7L_065

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_31531.3

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

13

Unit IDs

9H9H|1|A|U|1445
9H9H|1|A|A|1446
9H9H|1|A|A|1447
9H9H|1|A|C|1448
*
9H9H|1|A|G|1455
9H9H|1|A|A|1456
9H9H|1|A|G|1457

Current chains

Chain A

16S RNA (1534-MER)

Nearby chains

Chain T

Small ribosomal subunit protein bS20