IL_9H9J_046
3D structure
- PDB id
- 9H9J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex 2 (BODY) 30S-IF1-IF3-tRNA-GE81112
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GGAG*UGAC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9H9J_046 not in the Motif Atlas
- Geometric match to IL_4LFB_060
- Geometric discrepancy: 0.1577
- The information below is about IL_4LFB_060
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_58355.1
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 44
Unit IDs
9H9J|1|A|G|1416
9H9J|1|A|G|1417
9H9J|1|A|A|1418
9H9J|1|A|G|1419
*
9H9J|1|A|U|1481
9H9J|1|A|G|1482
9H9J|1|A|A|1483
9H9J|1|A|C|1484
Current chains
- Chain A
- 16S RNA (1078-MER)
Nearby chains
- Chain L
- Small ribosomal subunit protein uS12
Coloring options: