IL_9HA1_025

3D structure

PDB id

9HA1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pooled 50S subunit C_(L22)- precursor states supplemented with Api137 - Canonical PET exit Api137

Experimental method

ELECTRON MICROSCOPY

Resolution

4.17 Å

Loop

Sequence

UUAAGUGGGAAAC*GGAAGAUGUAACGGGGCUAAA

Length

34 nucleotides

Bulged bases

9HA1|1|A|U|1130, 9HA1|1|A|G|1131

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HA1|1|A|U|1018
9HA1|1|A|U|1019
9HA1|1|A|A|1020
9HA1|1|A|A|1021
9HA1|1|A|G|1022
9HA1|1|A|U|1023
9HA1|1|A|G|1024
9HA1|1|A|G|1025
9HA1|1|A|G|1026
9HA1|1|A|A|1027
9HA1|1|A|A|1028
9HA1|1|A|A|1029
9HA1|1|A|C|1030
*
9HA1|1|A|G|1124
9HA1|1|A|G|1125
9HA1|1|A|A|1126
9HA1|1|A|A|1127
9HA1|1|A|G|1128
9HA1|1|A|A|1129
9HA1|1|A|U|1130
9HA1|1|A|G|1131
9HA1|1|A|U|1132
9HA1|1|A|A|1133
9HA1|1|A|A|1134
9HA1|1|A|C|1135
9HA1|1|A|G|1136
9HA1|1|A|G|1137
9HA1|1|A|G|1138
9HA1|1|A|G|1139
9HA1|1|A|C|1140
9HA1|1|A|U|1141
9HA1|1|A|A|1142
9HA1|1|A|A|1143
9HA1|1|A|A|1144

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain J

Large ribosomal subunit protein uL13