IL_9HA1_061

3D structure

PDB id

9HA1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pooled 50S subunit C_(L22)- precursor states supplemented with Api137 - Canonical PET exit Api137

Experimental method

ELECTRON MICROSCOPY

Resolution

4.17 Å

Loop

Sequence

CU*AAG

Length

5 nucleotides

Bulged bases

9HA1|1|A|A|2800

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9HA1_061 not in the Motif Atlas

Geometric match to IL_8C3A_031

Geometric discrepancy: 0.2431

The information below is about IL_8C3A_031

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_31462.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

127

Unit IDs

9HA1|1|A|C|2795
9HA1|1|A|U|2796
*
9HA1|1|A|A|2799
9HA1|1|A|A|2800
9HA1|1|A|G|2801

Current chains

Chain A

23S ribosomal RNA

Nearby chains