IL_9HA2_025

3D structure

PDB id

9HA2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pooled 50S subunit C_(L22)- precursor states supplemented with Api137 - Alternative PET exit Api137

Experimental method

ELECTRON MICROSCOPY

Resolution

4.17 Å

Loop

Sequence

UUAAGUGGGAAAC*GGAAGAUGUAACGGGGCUAAA

Length

34 nucleotides

Bulged bases

9HA2|1|A|U|1130, 9HA2|1|A|G|1131

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HA2|1|A|U|1018
9HA2|1|A|U|1019
9HA2|1|A|A|1020
9HA2|1|A|A|1021
9HA2|1|A|G|1022
9HA2|1|A|U|1023
9HA2|1|A|G|1024
9HA2|1|A|G|1025
9HA2|1|A|G|1026
9HA2|1|A|A|1027
9HA2|1|A|A|1028
9HA2|1|A|A|1029
9HA2|1|A|C|1030
*
9HA2|1|A|G|1124
9HA2|1|A|G|1125
9HA2|1|A|A|1126
9HA2|1|A|A|1127
9HA2|1|A|G|1128
9HA2|1|A|A|1129
9HA2|1|A|U|1130
9HA2|1|A|G|1131
9HA2|1|A|U|1132
9HA2|1|A|A|1133
9HA2|1|A|A|1134
9HA2|1|A|C|1135
9HA2|1|A|G|1136
9HA2|1|A|G|1137
9HA2|1|A|G|1138
9HA2|1|A|G|1139
9HA2|1|A|C|1140
9HA2|1|A|U|1141
9HA2|1|A|A|1142
9HA2|1|A|A|1143
9HA2|1|A|A|1144

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain J

Large ribosomal subunit protein uL13