IL_9HA3_010

3D structure

PDB id

9HA3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pooled 50S subunit C_(L22)-~H61 precursor states supplemented with Api137

Experimental method

ELECTRON MICROSCOPY

Resolution

3.62 Å

Loop

Sequence

CCUGAAUC*GUGAG

Length

13 nucleotides

Bulged bases

9HA3|1|A|U|276, 9HA3|1|A|G|277

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9HA3_010 not in the Motif Atlas

Homologous match to IL_5J7L_253

Geometric discrepancy: 0.3579

The information below is about IL_5J7L_253

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_77870.1

Basepair signature

cWW-L-R-L-tHS-L-cWW-L-cWW

Number of instances in this motif group

2

Unit IDs

9HA3|1|A|C|274
9HA3|1|A|C|275
9HA3|1|A|U|276
9HA3|1|A|G|277
9HA3|1|A|A|278
9HA3|1|A|A|279
9HA3|1|A|U|280
9HA3|1|A|C|281
*
9HA3|1|A|G|359
9HA3|1|A|U|360
9HA3|1|A|G|361
9HA3|1|A|A|362
9HA3|1|A|G|363

Current chains

Chain A

23S ribosomal RNA

Nearby chains