3D structure

PDB id
9HA3 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Pooled 50S subunit C_(L22)-~H61 precursor states supplemented with Api137
Experimental method
ELECTRON MICROSCOPY
Resolution
3.62 Å

Loop

Sequence
GAAAC*GAGAUAGC
Length
13 nucleotides
Bulged bases
9HA3|1|A|G|801
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9HA3|1|A|G|674
9HA3|1|A|A|675
9HA3|1|A|A|676
9HA3|1|A|A|677
9HA3|1|A|C|678
*
9HA3|1|A|G|799
9HA3|1|A|A|800
9HA3|1|A|G|801
9HA3|1|A|A|802
9HA3|1|A|U|803
9HA3|1|A|A|804
9HA3|1|A|G|805
9HA3|1|A|C|806

Current chains

Chain A
23S ribosomal RNA

Nearby chains

Chain E
Large ribosomal subunit protein uL4

Coloring options:

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