IL_9HA3_029

3D structure

PDB id

9HA3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pooled 50S subunit C_(L22)-~H61 precursor states supplemented with Api137

Experimental method

ELECTRON MICROSCOPY

Resolution

3.62 Å

Loop

Sequence

UUAAGUGGGAAAC*GGAAGAUGUAACGGGGCUAAA

Length

34 nucleotides

Bulged bases

9HA3|1|A|U|1130, 9HA3|1|A|G|1131, 9HA3|1|A|U|1132, 9HA3|1|A|A|1133

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HA3|1|A|U|1018
9HA3|1|A|U|1019
9HA3|1|A|A|1020
9HA3|1|A|A|1021
9HA3|1|A|G|1022
9HA3|1|A|U|1023
9HA3|1|A|G|1024
9HA3|1|A|G|1025
9HA3|1|A|G|1026
9HA3|1|A|A|1027
9HA3|1|A|A|1028
9HA3|1|A|A|1029
9HA3|1|A|C|1030
*
9HA3|1|A|G|1124
9HA3|1|A|G|1125
9HA3|1|A|A|1126
9HA3|1|A|A|1127
9HA3|1|A|G|1128
9HA3|1|A|A|1129
9HA3|1|A|U|1130
9HA3|1|A|G|1131
9HA3|1|A|U|1132
9HA3|1|A|A|1133
9HA3|1|A|A|1134
9HA3|1|A|C|1135
9HA3|1|A|G|1136
9HA3|1|A|G|1137
9HA3|1|A|G|1138
9HA3|1|A|G|1139
9HA3|1|A|C|1140
9HA3|1|A|U|1141
9HA3|1|A|A|1142
9HA3|1|A|A|1143
9HA3|1|A|A|1144

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain J

Large ribosomal subunit protein uL13