IL_9HA3_035

3D structure

PDB id

9HA3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pooled 50S subunit C_(L22)-~H61 precursor states supplemented with Api137

Experimental method

ELECTRON MICROSCOPY

Resolution

3.62 Å

Loop

Sequence

CCAAC*GGG

Length

8 nucleotides

Bulged bases

9HA3|1|A|G|1332

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9HA3_035 not in the Motif Atlas

Geometric match to IL_8CRE_126

Geometric discrepancy: 0.3098

The information below is about IL_8CRE_126

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_83150.2

Basepair signature

cWW-tHH-cWW-L-L

Number of instances in this motif group

4

Unit IDs

9HA3|1|A|C|1319
9HA3|1|A|C|1320
9HA3|1|A|A|1321
9HA3|1|A|A|1322
9HA3|1|A|C|1323
*
9HA3|1|A|G|1331
9HA3|1|A|G|1332
9HA3|1|A|G|1333

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain T

Large ribosomal subunit protein uL23

Chain y

Apidaecins type 22